User contributions for Dawes001

20 July 2018

• 13:4113:41, 20 July 2018 diff hist +844‎ Using Slurm ‎ →‎Submitting jobs: sbatch

12 July 2018

• 16:4716:47, 12 July 2018 diff hist +115‎ Services ‎No edit summary
• 16:4516:45, 12 July 2018 diff hist +31‎ Services ‎No edit summary
• 16:4416:44, 12 July 2018 diff hist +53‎ Main Page ‎No edit summary

4 July 2018

• 13:0213:02, 4 July 2018 diff hist 0‎ File:HPC Advanced 20180518-GD.pdf ‎ Dawes001 uploaded a new version of File:HPC Advanced 20180518-GD.pdf current
• 13:0013:00, 4 July 2018 diff hist +62‎ Courses ‎No edit summary
• 12:5912:59, 4 July 2018 diff hist 0‎ N File:HPC Advanced 20180518-GD.pdf ‎No edit summary

23 May 2018

• 10:2310:23, 23 May 2018 diff hist +459‎ Parallel R code on SLURM ‎No edit summary
• 09:4709:47, 23 May 2018 diff hist +72‎ Installing R packages locally ‎ →‎See also
• 09:4709:47, 23 May 2018 diff hist +74‎ Control R environment using modules ‎ →‎See also current

18 May 2018

• 11:0611:06, 18 May 2018 diff hist 0‎ N File:Dawes001 HPC Advanced 2018-05.pdf ‎No edit summary current

16 May 2018

• 15:1915:19, 16 May 2018 diff hist +572‎ Courses ‎No edit summary

8 May 2018

• 11:5411:54, 8 May 2018 diff hist +74‎ Log in to Anunna ‎No edit summary
• 11:5311:53, 8 May 2018 diff hist +4‎ Log in to Anunna ‎No edit summary
• 11:5111:51, 8 May 2018 diff hist 0‎ SACCT ‎No edit summary
• 11:5111:51, 8 May 2018 diff hist 0‎ Migration from ESG HPC ‎ →‎Example of a job script
• 11:5011:50, 8 May 2018 diff hist 0‎ MPI on B4F cluster ‎No edit summary
• 11:5011:50, 8 May 2018 diff hist +1‎ Using Slurm ‎No edit summary
• 11:4911:49, 8 May 2018 diff hist −25‎ Creating sbatch script ‎No edit summary

9 November 2017

• 14:4314:43, 9 November 2017 diff hist +204‎ Courses ‎ →‎HPC Advanced Course - 2017-11-09
• 14:4014:40, 9 November 2017 diff hist 0‎ N File:Checkpointing 2017-11-08.pdf ‎No edit summary current
• 14:3914:39, 9 November 2017 diff hist 0‎ N File:HPC Advanced course 2017-11-08-GD.pdf ‎No edit summary current
• 14:3914:39, 9 November 2017 diff hist 0‎ N File:HPC Advanced course 2017-11-08-JV.pdf ‎No edit summary current

8 November 2017

• 14:2614:26, 8 November 2017 diff hist +785‎ Filesystems ‎No edit summary

2 November 2017

• 12:3412:34, 2 November 2017 diff hist −72‎ SACCT ‎No edit summary
• 11:3911:39, 2 November 2017 diff hist +532‎ Courses ‎No edit summary
• 11:3611:36, 2 November 2017 diff hist 0‎ N File:HPC basic course 20171025.pdf ‎No edit summary current

31 October 2017

• 09:2509:25, 31 October 2017 diff hist +2‎ Log in to Anunna ‎ →‎WinSCP
• 09:2409:24, 31 October 2017 diff hist +94‎ Log in to Anunna ‎ →‎Log on to worker nodes

7 September 2017

• 10:4810:48, 7 September 2017 diff hist +41‎ N Installed software ‎ Redirected page to Globally installed software current

6 September 2017

• 11:0111:01, 6 September 2017 diff hist +33‎ Creating sbatch script ‎ →‎See also
• 11:0011:00, 6 September 2017 diff hist +13‎ Array jobs ‎No edit summary
• 10:5910:59, 6 September 2017 diff hist −8‎ Array jobs ‎No edit summary
• 10:5910:59, 6 September 2017 diff hist +2,441‎ N Array jobs ‎ Created page with "SLURM can simplify your efforts if you are planning on submitting multiple independent jobs in parallel. Rather than having to use sbatch multiple times, you can instead use a..."
• 10:4110:41, 6 September 2017 diff hist +225‎ Using Slurm ‎ →‎Submitting jobs: sbatch

4 September 2017

• 09:5109:51, 4 September 2017 diff hist +3,784‎ Node usage graph ‎No edit summary

25 August 2017

• 09:1409:14, 25 August 2017 diff hist +679‎ Creating sbatch script ‎ →‎Explanation of used SBATCH parameters

24 August 2017

• 15:3815:38, 24 August 2017 diff hist −2‎ HPC management ‎ →‎Daily Project Management current
• 15:2815:28, 24 August 2017 diff hist +177‎ N Cuda ‎ Created page with "CUDA® is a parallel computing platform and programming model invented by NVIDIA. It is a module designed to allow you to write code for NVIDIA graphics processing units (GPUs)." current
• 15:2515:25, 24 August 2017 diff hist −4‎ Canu ‎No edit summary current
• 15:2515:25, 24 August 2017 diff hist +523‎ N Canu ‎ Created page with "Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II/Sequel or Oxford Nanopore MinION). Canu is a hierarchical..."
• 15:2415:24, 24 August 2017 diff hist +29‎ Globally installed software ‎ →‎Available as modules
• 15:2315:23, 24 August 2017 diff hist +41‎ N Software ‎ Redirected page to Globally installed software current

21 August 2017

• 14:2914:29, 21 August 2017 diff hist +393‎ N Matlab ‎ Created page with "MATLAB is a non-free calculation language owned by Mathworks. The HPC has this installed as part of the WUR academic license, and so this is only available to WUR users. == U..."
• 14:2614:26, 21 August 2017 diff hist +13‎ Globally installed software ‎No edit summary

7 August 2017

• 10:3110:31, 7 August 2017 diff hist +8‎ Dmtcp ‎ Redirected page to Checkpointing current
• 10:3110:31, 7 August 2017 diff hist +12‎ Globally installed software ‎No edit summary
• 10:3010:30, 7 August 2017 diff hist +19‎ N Dmtcp ‎ Redirected page to DMTCP
• 10:3010:30, 7 August 2017 diff hist +27‎ N DMTCP ‎ Redirected page to Checkpointing current

26 July 2017

• 13:5113:51, 26 July 2017 diff hist +24‎ Filesystems ‎No edit summary