Genewise 2.2.3

From HPCwiki
Revision as of 14:49, 15 June 2023 by Prins0891 (talk | contribs) (<source> to <pre> to fix code blocks)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to navigation Jump to search

Compares a protein sequence to a genomic DNA sequence, allowing for introns and frameshifting errors.

Module file

The module file can be found in this location:

 /cm/shared/modulefiles/SHARED/
#%Module1.0#######################################################################
## genewise 2.2.3-rc7 modulefile
##
proc ModulesHelp { } {

        puts stderr "\tAdds genewise 2.2.3 to your environment"
}

module-whatis   "Adds genewise 2.2.3 to your environment"

set             genewise_223_root        /cm/shared/apps/SHARED/genewise/wise2.2.3-rc7/src/bin/
set             genewise_conf            /cm/shared/apps/SHARED/genewise/wise2.2.3-rc7/wisecfg


prepend-path     PATH             $genewise_223_root
prepend-path     WISECONFIGDIR    $genewise_conf

== Installation details ==
Compiled from source. Some problems compiling due to glib dependencies. Resolved by using the system-wide glib1.2 libraries, in combination with gcc 4.8.

See also

External links