Genewise 2.2.3

Compares a protein sequence to a genomic DNA sequence, allowing for introns and frameshifting errors.

Module file

The module file can be found in this location:

 /cm/shared/modulefiles/SHARED/

#%Module1.0#######################################################################
## genewise 2.2.3-rc7 modulefile
##
proc ModulesHelp { } {

        puts stderr "\tAdds genewise 2.2.3 to your environment"
}

module-whatis   "Adds genewise 2.2.3 to your environment"

set             genewise_223_root        /cm/shared/apps/SHARED/genewise/wise2.2.3-rc7/src/bin/
set             genewise_conf            /cm/shared/apps/SHARED/genewise/wise2.2.3-rc7/wisecfg


prepend-path     PATH             $genewise_223_root
prepend-path     WISECONFIGDIR    $genewise_conf

== Installation details ==
Compiled from source. Some problems compiling due to glib dependencies. Resolved by using the system-wide glib1.2 libraries, in combination with gcc 4.8.

See also

• Globally installed software
• ABGC specific modules

External links

• Genewise at EBI