Allpathslg 48961

ALLPATHS-LG is a popular genome assembler.

Module file

The module file can be found in this location:

 /cm/shared/modulefiles/SHARED/

<source lang='tcl'>

1. %Module1.0#######################################################################
   1. maker ALLPATHS-LG (48961 modulefile

proc ModulesHelp { } {

       puts stderr "\tAdds ALLPATHS-LG (48961) to your environment"

}

module-whatis "Adds ALLPATHS-LG (48961) to your environment"

module load gcc/4.8.1

set allpathslg_48961_root /cm/shared/apps/SHARED/ALLPATHS-LG/allpathslg-48961/src/

prepend-path PATH $allpathslg_48961_root

</source>

Installation details

ALLPATHS-LG was compiled from source (using gcc4.8) on 15-03-2014: Source was downloaded by choosing the 'latests' link from here: http://www.broadinstitute.org/software/allpaths-lg/blog/?page_id=12

See also

• Globally installed software
• ABGC specific modules

External links

• ALLPATHS-LG home page

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