Allpathslg 48961

ALLPATHS-LG is a popular genome assembler.

Module file

The module file can be found in this location:

 /cm/shared/modulefiles/SHARED/

#%Module1.0#######################################################################
## maker ALLPATHS-LG (48961 modulefile
##
proc ModulesHelp { } {

        puts stderr "\tAdds ALLPATHS-LG (48961) to your environment"
}

module-whatis   "Adds ALLPATHS-LG (48961) to your environment"

module load gcc/4.8.1

set             allpathslg_48961_root        /cm/shared/apps/SHARED/ALLPATHS-LG/allpathslg-48961/program/bin/

prepend-path     PATH             $allpathslg_48961_root

Installation details

ALLPATHS-LG was compiled from source (using gcc4.8) on 15-03-2014: Source was downloaded by choosing the 'latests' link from here: http://www.broadinstitute.org/software/allpaths-lg/blog/?page_id=12

See also

• Globally installed software
• ABGC specific modules

External links

• ALLPATHS-LG home page