Bioinformatics protocols ABG Chairgroup

This page is intended as a portal to pages concerning best practices, workflows and pipelines, and other protocols (including scripts).

• Mapping Illumina GA2/HiSeq reads to the Sus scrofa genome assembly
• A Perl script to conver fastq to fasta file format
• Setup Printers on Ubuntu Machines
• Mapping Pair-end reads with Stampy
• Create slices from a collection of BAM files