Bowtie2 v2.2.1
SOAPdenovo2 is a popular genome assembler.
Module file
The module file can be found in this location:
/cm/shared/modulefiles/SHARED/
#%Module1.0#######################################################################
## bowtie2-2.2.1 modulefile
##
proc ModulesHelp { } {
puts stderr "\tAdds bowtie2-2.2.1 to your environment"
}
module-whatis "Adds bowtie2-2.2.1 to your environment"
set bowtie2_2_2_1_root /cm/shared/apps/SHARED/bowtie/bowtie2-2.2.1/
prepend-path PATH $bowtie2_2_2_1_root
Installation details
The pre-compiled binaries were downloaded from SourceForge on 15-03-2014:
http://sourceforge.net/projects/bowtie-bio/files/bowtie2/2.2.1/
This included the GapCloser software (v1.12) and ErrorCorrection (v0.04)
See also
External links
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