MAFFT 7.130: Difference between revisions
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/cm/shared/modulefiles/SHARED/ | /cm/shared/modulefiles/SHARED/ | ||
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#%Module1.0####################################################################### | #%Module1.0####################################################################### | ||
## MAFFT 7.130 modulefile | ## MAFFT 7.130 modulefile | ||
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prepend-path PATH $mafft_7_root | prepend-path PATH $mafft_7_root | ||
</ | </pre> | ||
== Installation details == | == Installation details == | ||
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<source lang='bash'> | <source lang='bash'> | ||
wget http://mafft.cbrc.jp/alignment/software/mafft-7.130-with-extensions-src.tgz | wget http://mafft.cbrc.jp/alignment/software/mafft-7.130-with-extensions-src.tgz | ||
</ | </pre> | ||
== See also == | == See also == | ||
Latest revision as of 14:49, 15 June 2023
MAFFT is a multiple sequence alignment program for unix-like operating systems. It offers a range of multiple alignment methods, L-INS-i (accurate; for alignment of <∼200 sequences), FFT-NS-2 (fast; for alignment of <∼10,000 sequences), etc.
Module file
The module file can be found in this location:
/cm/shared/modulefiles/SHARED/
#%Module1.0#######################################################################
## MAFFT 7.130 modulefile
##
proc ModulesHelp { } {
puts stderr "\tAdds MAFFT 7.130 to your environment"
}
module-whatis "Adds MAFFT 7.130 to your environment"
setenv MAFFT_BINARIES /cm/shared/apps/SHARED/MAFFT/mafft-7.130-with-extensions/binaries
set mafft_7_root /cm/shared/apps/SHARED/MAFFT/mafft-7.130-with-extensions/bin
prepend-path PATH $mafft_7_root
Installation details
Downloaded as source: <source lang='bash'> wget http://mafft.cbrc.jp/alignment/software/mafft-7.130-with-extensions-src.tgz