Blat v35: Difference between revisions
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''' | '''[http://en.wikipedia.org/wiki/BLAT_(bioinformatics) BLAT]''' (BLAST-like alignment tool) is a pairwise sequence alignment algorithm that was developed by Jim Kent at the University of California Santa Cruz (UCSC) in the early 2000s to assist in the assembly and annotation of the Human Genome. | ||
== Module file == | == Module file == | ||
Revision as of 23:55, 20 December 2013
BLAT (BLAST-like alignment tool) is a pairwise sequence alignment algorithm that was developed by Jim Kent at the University of California Santa Cruz (UCSC) in the early 2000s to assist in the assembly and annotation of the Human Genome.
Module file
The module file can be found in this location:
/cm/shared/apps/WUR/ABGC/modulefiles
#%Module1.0#######################################################################
## blat suite (v35) plus tools (2013-20-12 download) modulefile
##
proc ModulesHelp { } {
puts stderr "\tAdds the entire blat suite (v35) including blat tools (2013-20-12 download) to your environment"
}
module-whatis "Adds the entire blat suite (v35) including blat tools (2013-20-12 download) to your environment"
set blat_root /cm/shared/apps/WUR/ABGC/blat/blat-v35/blat
set blat_tools_root /cm/shared/apps/WUR/ABGC/blat/blat-v35
prepend-path PATH $blat_tools_root
prepend-path PATH $blat_root