Maker 2.2.8: Difference between revisions

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== External links ==
== External links ==
* [http://gmod.org/wiki/MAKER_Tutorial_2013 | Maker tutorial]

Revision as of 21:10, 20 December 2013

Maker is gene prediction/annotation pipeline.

Module file

The module file can be found in this location:

 /cm/shared/apps/WUR/ABGC/modulefiles

<source lang='tcl'>

  1. %Module1.0#######################################################################
    1. maker 2.28 modulefile

proc ModulesHelp { } {

       puts stderr "\tAdds maker 2.28 to your environment"

}

module-whatis "Adds maker 2.28 to your environment"

module load BLAST+/2.2.28 RepeatMasker/4.0.3 exonerate/2.2.0-x86_64 snap/2013-11-29 augustus/2.7

set maker_228_root /cm/shared/apps/WUR/ABGC/maker/maker-2.28/src/bin

prepend-path PATH $maker_228_root set maker_228_perllib /cm/shared/apps/WUR/ABGC/maker/maker-2.28/perl/lib:/cm/shared/apps/WUR/ABGC/maker/maker-2.28/lib

prepend-path PERL5LIB $maker_228_perllib </source>

See also

External links