Wgs assembler 8.1: Difference between revisions
(Created page with "[http://en.wikipedia.org/wiki/Burrows-Wheeler_Aligner#Short-Read_Sequence_Alignment BWA] is a short read aligner designed by Heng Li and currently the most widely used aligner...") |
No edit summary |
||
| Line 1: | Line 1: | ||
[http:// | [http://sourceforge.net/apps/mediawiki/wgs-assembler/index.php?title=Main_Page Celera Assembler] is a de novo whole-genome shotgun (WGS) DNA sequence assembler. It reconstructs long sequences of genomic DNA from fragmentary data produced by whole-genome shotgun sequencing. Celera Assembler has enabled many advances in genomics, including the first whole genome shotgun sequence of a multi-cellular organism and the first diploid sequence of an individual human. Celera Assembler was developed at Celera Genomics starting in 1999. It was released to SourceForge in 2004 as the [http://sourceforge.net/apps/mediawiki/wgs-assembler/index.php?title=Main_Page wgs-assembler] under the GNU General Public License. The pipeline revised for 454 data was named CABOG. | ||
== Module file == | == Module file == | ||
| Line 22: | Line 22: | ||
</source> | </source> | ||
http://sourceforge.net/projects/wgs-assembler/files/wgs-assembler/wgs-8.1/ | |||
== See also == | == See also == | ||
Revision as of 21:14, 17 March 2014
Celera Assembler is a de novo whole-genome shotgun (WGS) DNA sequence assembler. It reconstructs long sequences of genomic DNA from fragmentary data produced by whole-genome shotgun sequencing. Celera Assembler has enabled many advances in genomics, including the first whole genome shotgun sequence of a multi-cellular organism and the first diploid sequence of an individual human. Celera Assembler was developed at Celera Genomics starting in 1999. It was released to SourceForge in 2004 as the wgs-assembler under the GNU General Public License. The pipeline revised for 454 data was named CABOG.
Module file
The module file can be found in this location:
/cm/shared/modulefiles/SHARED/
<source lang='tcl'>
- %Module1.0#######################################################################
- Celera WGS Assembler 8.1 modulefile
proc ModulesHelp { } {
puts stderr "\tAdds Celera WGS Assembler to your environment"
}
module-whatis "Adds Celera WGS Assembler to your environment"
set wgs_81_root /cm/shared/apps/SHARED/wgs-assembler/wgs-8.1/Linux-amd64/bin/
prepend-path PATH $wgs_81_root
</source>
http://sourceforge.net/projects/wgs-assembler/files/wgs-assembler/wgs-8.1/