Bioinformatics protocols ABG Chairgroup: Difference between revisions
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This page is intended as a portal to pages concerning best practices, workflows and pipelines, and other protocols (including scripts). | This page is intended as a portal to pages concerning best practices, workflows and pipelines, and other protocols (including scripts). | ||
== A list of tutorials, workflows, and recipes == | |||
* [[Mapping_reads_with_Mosaik | Mapping Illumina GA2/HiSeq reads to the Sus scrofa genome assembly]] | * [[Mapping_reads_with_Mosaik | Mapping Illumina GA2/HiSeq reads to the Sus scrofa genome assembly]] | ||
* [[convert_fastq_to_fasta | A Perl script to convert fastq to fasta file format]] | * [[convert_fastq_to_fasta | A Perl script to convert fastq to fasta file format]] | ||
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* [[Setting_up_Python_virtualenv | Setting up and using a virtual environment for Python3 ]] | * [[Setting_up_Python_virtualenv | Setting up and using a virtual environment for Python3 ]] | ||
* [[ssh_without_password | ssh without password]] | * [[ssh_without_password | ssh without password]] | ||
== See also == | |||
* [[B4F_cluster | B4F Cluster]] | |||
* [[Lx6_and_Lx7_compute_nodes | Lx6 and Lx7 compute nodes]] | |||
== External links == | |||
Revision as of 22:04, 24 November 2013
This page is intended as a portal to pages concerning best practices, workflows and pipelines, and other protocols (including scripts).
A list of tutorials, workflows, and recipes
- Mapping Illumina GA2/HiSeq reads to the Sus scrofa genome assembly
- A Perl script to convert fastq to fasta file format
- Setup Printers on Ubuntu Machines
- Mapping Pair-end reads with Stampy
- Create slices from a collection of BAM files
- Setting up and using a virtual environment for Python3
- ssh without password