Plink 1.9: Difference between revisions
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(Created page with "[https://www.cog-genomics.org/plink2/ PLINK] is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a...") |
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/cm/shared/modulefiles/SHARED/ | /cm/shared/modulefiles/SHARED/ | ||
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#%Module1.0####################################################################### | #%Module1.0####################################################################### | ||
## plink 1.9 modulefile | ## plink 1.9 modulefile | ||
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prepend-path PATH $plink_v19_root | prepend-path PATH $plink_v19_root | ||
</ | </pre> | ||
== Installation details == | == Installation details == | ||
Latest revision as of 14:51, 15 June 2023
PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. Development of the baseline PLINK toolset has resumed and beta testing for the next (1.90) release has now begun.The new release, by Chris Chang and colleagues, is a complete rewrite of the original code and represents a very significant improvement in overall speed and functionality. Moving forward, these changes should enable PLINK to meet the demands of ever-larger genetic datasets.
Module file
The module file can be found in this location:
/cm/shared/modulefiles/SHARED/
#%Module1.0#######################################################################
## plink 1.9 modulefile
##
proc ModulesHelp { } {
puts stderr "\tAdds plink v1.9 to your environment"
}
module-whatis "Adds plink v1.9 to your environment"
set plink_v19_root /cm/shared/apps/SHARED/plink/1.9
prepend-path PATH $plink_v19_root
Installation details
Installed from downloaded 64bit binary, see external links.