Exonerate 2.2.0: Difference between revisions
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[https://www.ebi.ac.uk/~guy/exonerate/ Exonerate] is a generic tool for pairwise sequence comparison. It allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics. | |||
== Module file == | == Module file == | ||
The module file can be found in this location: | The module file can be found in this location: | ||
/cm/shared/ | /cm/shared/modulefiles/SHARED/ | ||
<source lang='tcl'> | <source lang='tcl'> | ||
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module-whatis "Adds exonerate 2.2.0-x86_64 to your environment" | module-whatis "Adds exonerate 2.2.0-x86_64 to your environment" | ||
set exonerate_220_root /cm/shared/apps/ | set exonerate_220_root /cm/shared/apps/SHARED/exonerate/exonerate-2.2.0-x86_64/bin | ||
prepend-path PATH $exonerate_220_root | prepend-path PATH $exonerate_220_root | ||
</source> | </source> | ||
== Installation details == | |||
Installed as pre- compiled libraries downloaded from the Exonerate [https://www.ebi.ac.uk/~guy/exonerate/exonerate-2.2.0-x86_64.tar.gz download page] | |||
== See also == | == See also == | ||
| Line 26: | Line 28: | ||
== External links == | == External links == | ||
* [ | * [https://www.ebi.ac.uk/~guy/exonerate/ Exonerate homepage at EBI] | ||
Latest revision as of 09:59, 15 March 2014
Exonerate is a generic tool for pairwise sequence comparison. It allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics.
Module file
The module file can be found in this location:
/cm/shared/modulefiles/SHARED/
<source lang='tcl'>
- %Module1.0#######################################################################
- exonerate 2.2.0-x86_64 modulefile
proc ModulesHelp { } {
puts stderr "\tAdds exonerate 2.2.0-x86_64 to your environment"
}
module-whatis "Adds exonerate 2.2.0-x86_64 to your environment"
set exonerate_220_root /cm/shared/apps/SHARED/exonerate/exonerate-2.2.0-x86_64/bin
prepend-path PATH $exonerate_220_root </source>
Installation details
Installed as pre- compiled libraries downloaded from the Exonerate download page