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• 13:11, 29 May 2026 Haars0011 talk contribs deleted page DE expression (content was: "=== Typical commands used for doing a DE expression study using Tophat (including Bowtie2 as aligner), Stringtie and Cuffdiff === Author: Martijn Derks * Samtools, Trimmomatic, Tophat, Bowtie2, Stringtie, Cufflinks need to be in PATH. * Use case in wintermoth. 12 samples (1 Egg, 1 Caterpillar, 3x3 Pupa, 1 Moth). ===Trim sequences for quality and adapters=== <source lang...", and the only contributor was "Derks047" (talk))