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Anunna is a [http://en.wikipedia.org/wiki/High-performance_computing High Performance Computer] (HPC) infrastructure hosted by [http://www.wageningenur.nl/nl/activiteit/Opening-High-Performance-Computing-cluster-HPC.htm Wageningen University & Research Centre]. It is open for use for all WUR research groups as well as other organizations, including companies, that have collaborative projects with WUR.  
Anunna is a [http://en.wikipedia.org/wiki/High-performance_computing High Performance Computing] (HPC) cluster hosted by [https://www.wur.nl/ Wageningen University & Research]. It is open to all WUR research groups, and to other organisations and companies running collaborative projects with WUR.


= Using Anunna =
You reach the cluster over [[SSH Access|SSH]] at <code>login.anunna.wur.nl</code>, or through your browser at the [[Apps Portal]] (https://apps.anunna.wur.nl/).
* [[Tariffs | Costs associated with resource usage]]


== Gaining access to Anunna==
== Documentation ==
Access to the cluster and file transfer are traditionally done via [http://en.wikipedia.org/wiki/Secure_Shell SSH and SFTP].
* [[log_in_to_B4F_cluster | Logging into cluster using ssh]]
* [[file_transfer | File transfer options]]
* [[Services | Alternative access methods, and extra features and services on Anunna]]
* [[Filesystems | Data storage methods on Anunna]]


== Access Policy ==
=== Start here ===
[[Access_Policy | Main Article: Access Policy]]


Access needs to be granted actively (by creation of an account on the cluster by FB-IT). Use of resources is limited by the scheduler. Depending on availability of queues ('partitions') granted to a user, priority to the system's resources is regulated. Note that the use of Anunna is not free of charge. List price of CPU time and storage, and possible discounts on that list price for your organisation, can be retrieved from Shared Research Facilities or FB-IT.
* [[About]] — what Anunna is, how it is built and run, and the policies that apply
* [[Get Started]] — eligibility, getting an account, and logging in
* [[Glossary of Terms]] — common HPC and Anunna terms explained


= Events =
=== Using the cluster ===
* Upcoming courses on 23rd + 30th June!


* Linux Basic - 23rd June
* [[System Access]] — login and compute nodes, filesystems, data transfer
* [[Scheduling]] — submitting and managing jobs with SLURM
* [[Software]] — modules, languages, containers, and licensed software
* [[Storage]] — the storage tiers and how data is kept and protected
* [[Apps Portal]] — graphical applications and desktops in your browser
* [[Workflows]] — reproducible, efficient research workflows


* HPC Basic - 30th June
=== Help and more ===


* [[Courses]] that have happened and are happening
* [[Training]] — courses, tutorials, and reference material
* [[Downtime]] that will affect all users
* [[Support]] — getting help, reporting problems, and cluster status
* [[Meetings]] that may affect the policies of Anunna
* [[For PIs]] — projects, allocations, and group management for group leaders


= Other Software =
== Quick links ==


== Cluster Management Software and Scheduler ==
* [[How to Get Help]] — contact the HPC team
Anunna uses Bright Cluster Manager software for overall cluster management, and Slurm as job scheduler.
* [[Tariffs]] — costs of using Anunna
* [[BCM_on_B4F_cluster | Monitor cluster status with BCM]]
* [[Maintenance Schedule]] — planned downtimes
* [[Using_Slurm | Submit jobs with Slurm]]
* [[node_usage_graph | Be aware of how much work the cluster is under right now with 'node_usage_graph']]
* [[SLURM_Compare | Rosetta Stone of Workload Managers]]


== Installation of software by users ==
== External links ==


* [[Domain_specific_software_on_B4Fcluster_installation_by_users | Installing domain specific software: installation by users]]
* [https://www.wur.nl/en/Value-Creation-Cooperation/Facilities/Wageningen-Shared-Research-Facilities/Our-facilities/Show/High-Performance-Computing-Cluster-HPC-Anunna.htm Wageningen Shared Research Facilities — HPC]
* [[Setting local variables]]
* [[Installing_R_packages_locally | Installing R packages locally]]
* [[Setting_up_Python_virtualenv | Setting up and using a virtual environment for Python3 ]]
* [[Virtual_environment_Python_3.4_or_higher | Setting up and using a virtual environment for Python3.4 or higher ]]
* [[Installing WRF and WPS]]
* [[Running scripts on a fixed timeschedule (cron)]]
 
== Installed software ==
 
* [[Globally_installed_software | Globally installed software]]
* [[ABGC_modules | ABGC specific modules]]
 
= Useful Notes =
 
== Being in control of Environment parameters ==
 
* [[Using_environment_modules | Using environment modules]]
* [[Setting local variables]]
* [[Setting_TMPDIR | Set a custom temporary directory location]]
* [[Installing_R_packages_locally | Installing R packages locally]]
* [[Setting_up_Python_virtualenv | Setting up and using a virtual environment for Python3 ]]
 
== Controlling costs ==
 
* [[SACCT | using SACCT to see your costs]]
* [[get_my_bill | using the "get_my_bill" script to estimate costs]]
 
== Management ==
Product Owner of Anunna is Alexander van Ittersum (Wageningen UR,FB-IT, C&PS). [[User:dawes001 | Gwen Dawes (Wageningen UR, FB-IT, C&PS)]] and [[User:haars001 | Jan van Haarst (Wageningen UR,FB-IT, C&PS)]] are responsible for [[Maintenance_and_Management | Maintenance and Management]] of the cluster.
 
* [[Roadmap | Ambitions regarding innovation, support and administration of Anunna ]]
 
= Miscellaneous =
* [[Mailinglist | Electronic mail discussion lists]]
* [[History_of_the_Cluster | Historical information on the startup of Anunna]]
* [[Bioinformatics_tips_tricks_workflows | Bioinformatics tips, tricks, and workflows]]
* [[Parallel_R_code_on_SLURM | Running parallel R code on SLURM]]
* [[Convert_between_MediaWiki_and_other_formats | Convert between MediaWiki format and other formats]]
* [[Manual GitLab | GitLab: Create projects and add scripts]]
* [[Monitoring_executions | Monitoring job execution]]
* [[Shared_folders | Working with shared folders in the Lustre file system]]
 
= See also =
* [[Maintenance_and_Management | Maintenance and Management]]
* [[BCData | BCData]]
* [[Mailinglist | Electronic mail discussion lists]]
* [[About_ABGC | About ABGC]]
* [[Computer_cluster | High Performance Computing @ABGC]]
* [[Lustre_PFS_layout | Lustre Parallel File System layout]]
 
= External links =
{| width="90%"
|- valign="top"
| width="30%" |
* [https://www.wur.nl/en/Value-Creation-Cooperation/Facilities/Wageningen-Shared-Research-Facilities/Our-facilities/Show/High-Performance-Computing-Cluster-HPC-Anunna.htm SRF offers a HPC facilty]
| width="30%" |
* [http://en.wikipedia.org/wiki/Scientific_Linux Scientific Linux]
* [http://en.wikipedia.org/wiki/Help:Cheatsheet Help with editing Wiki pages]
|}

Latest revision as of 12:28, 19 June 2026

Anunna is a High Performance Computing (HPC) cluster hosted by Wageningen University & Research. It is open to all WUR research groups, and to other organisations and companies running collaborative projects with WUR.

You reach the cluster over SSH at login.anunna.wur.nl, or through your browser at the Apps Portal (https://apps.anunna.wur.nl/).

Documentation

Start here

  • About — what Anunna is, how it is built and run, and the policies that apply
  • Get Started — eligibility, getting an account, and logging in
  • Glossary of Terms — common HPC and Anunna terms explained

Using the cluster

  • System Access — login and compute nodes, filesystems, data transfer
  • Scheduling — submitting and managing jobs with SLURM
  • Software — modules, languages, containers, and licensed software
  • Storage — the storage tiers and how data is kept and protected
  • Apps Portal — graphical applications and desktops in your browser
  • Workflows — reproducible, efficient research workflows

Help and more

  • Training — courses, tutorials, and reference material
  • Support — getting help, reporting problems, and cluster status
  • For PIs — projects, allocations, and group management for group leaders
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