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IA migration §9: restructure — latest slides + self-study on top, condensed past-sessions archive preserving slide PDFs (via update-page on MediaWiki MCP Server)
 
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* [http://www.basgen.nl/sdac/ Sequence Data Analysis Course (Dec. 2012)]
This page collects slides and self-study material for working on Anunna. To attend an instructor-led course, see [[Workshops]] and [[2026 Course dates]]; for hands-on tutorials, see [[Tutorials]].
 
== Latest course slides ==
 
The most recent slides for the three regular courses:
 
* [https://public.anunna.wur.nl/hpc-courses/Linux-Basics.pdf Linux Basics]
* [https://public.anunna.wur.nl/hpc-courses/HPC-Basics.pdf HPC Basics]
* [https://public.anunna.wur.nl/hpc-courses/HPC-Advanced.pdf HPC Advanced]
 
== Self-study ==
 
If you cannot attend a course, these resources let you learn at your own pace:
 
* [[Linux Basic/Linux Self Assessment]] — check whether your command-line skills are ready for the HPC and container courses.
* [https://labex.io/linuxjourney Linux Journey] — self-paced Linux learning, with free practice virtual machines.
* [https://www.linux-path.com/en Linux Path] — a fork of Linux Journey with additional curated material.
* [https://carpentries.org Software Carpentry] — community lessons on many topics (for the command line, see Learn → Lessons → Unix shell).
 
See also the [[Linux Basic]] page for more on the Linux fundamentals course.
 
== Past course sessions ==
 
Slides from earlier course sessions are kept here for reference.
 
; 2025 — Linux Basics
: [[:File:WUR Linux Basics Course Slides.pdf|Slides]]
; November 2021 — HPC Advanced
: [[:File:HPC advanced course 20211021.pdf|Slides 1]], [[:File:HPC advanced slides 20190528.pdf|Slides 2]]
; October 2021 — HPC Basic
: [[:File:HPC basic course 20211012.pdf|Slides]]
; June 2019 — HPC CUDA / AI (by Dell)
: [[:File:WUR CUDA 210619.pdf|CUDA]], [[:File:WUR CUDA 2 210619.pdf|CUDA 2]], [[:File:WUR AI 101 210619.pdf|AI 101]], [[:File:WUR AI 201 210619.pdf|AI 201]], [[:File:WUR Deep Learning Frameworks 210619.pdf|Deep Learning Frameworks]], [[:File:WUR Deep Learning Lab 210619.pdf|Deep Learning Lab]]
; November 2019 — HPC Basic
: [[:File:HPC basic course 20191111.pdf|Slides]]
; May 2019 — HPC Advanced
: [[:File:HPC advanced course 20190506.pdf|Slides 1]], [[:File:HPC advanced slides 20190528.pdf|Slides 2]]
; May 2019 — HPC Basic
: [[:File:HPC basic course 20190506.pdf|Slides]]
; October 2018 — HPC Advanced
: [[:File:HPC Advanced Slides 20181016.pdf|Slides 1]], [[:File:HPC advanced course 20181008.pdf|Slides 2]]
; October 2018 — HPC Basic
: [[:File:HPC basic course 20181008.pdf|Slides]]
; May 2018 — HPC Advanced
: [[:File:HPC Advanced 20180518-GD.pdf|Slides]]
; November 2017 — HPC Advanced
: [[:File:HPC Advanced course 2017-11-08-JV.pdf|Slides (Jeremie)]], [[:File:HPC Advanced course 2017-11-08-GD.pdf|Slides (Gwen)]], [[:File:Checkpointing 2017-11-08.pdf|Checkpointing]]
; October 2017 — HPC Basic
: [[:File:HPC basic course 20171025.pdf|Slides]]
; June 2017 — HPC Teaching
: [[:File:Connecting with Secure Shell to the HPC 20170606.pdf|Connecting with SSH]], [[:File:Submitting and monitoring jobs on the HPC 20170602.pdf|Submitting and monitoring jobs]]
; 2012 — Sequence Data Analysis Course
: [http://www.basgen.nl/sdac/ Course page]
 
== See also ==
* [[Workshops]]
* [[Tutorials]]
* [[2026 Course dates]]

Latest revision as of 14:40, 18 June 2026

This page collects slides and self-study material for working on Anunna. To attend an instructor-led course, see Workshops and 2026 Course dates; for hands-on tutorials, see Tutorials.

Latest course slides

The most recent slides for the three regular courses:

Self-study

If you cannot attend a course, these resources let you learn at your own pace:

  • Linux Basic/Linux Self Assessment — check whether your command-line skills are ready for the HPC and container courses.
  • Linux Journey — self-paced Linux learning, with free practice virtual machines.
  • Linux Path — a fork of Linux Journey with additional curated material.
  • Software Carpentry — community lessons on many topics (for the command line, see Learn → Lessons → Unix shell).

See also the Linux Basic page for more on the Linux fundamentals course.

Past course sessions

Slides from earlier course sessions are kept here for reference.

2025 — Linux Basics
Slides
November 2021 — HPC Advanced
Slides 1, Slides 2
October 2021 — HPC Basic
Slides
June 2019 — HPC CUDA / AI (by Dell)
CUDA, CUDA 2, AI 101, AI 201, Deep Learning Frameworks, Deep Learning Lab
November 2019 — HPC Basic
Slides
May 2019 — HPC Advanced
Slides 1, Slides 2
May 2019 — HPC Basic
Slides
October 2018 — HPC Advanced
Slides 1, Slides 2
October 2018 — HPC Basic
Slides
May 2018 — HPC Advanced
Slides
November 2017 — HPC Advanced
Slides (Jeremie), Slides (Gwen), Checkpointing
October 2017 — HPC Basic
Slides
June 2017 — HPC Teaching
Connecting with SSH, Submitting and monitoring jobs
2012 — Sequence Data Analysis Course
Course page

See also