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IA migration §9: restructure — latest slides + self-study on top, condensed past-sessions archive preserving slide PDFs (via update-page on MediaWiki MCP Server)
 
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== HPC Basic Course - 2019-11-14==
This page collects slides and self-study material for working on Anunna. To attend an instructor-led course, see [[Workshops]] and [[2026 Course dates]]; for hands-on tutorials, see [[Tutorials]].


A course for beginners was given on the 14th of November, aiming to help absolute beginners to begin to use the main job scheduler, SLURM.
== Latest course slides ==


[[File:HPC_basic_course_20191111.pdf|HPC Basic Course]]
The most recent slides for the three regular courses:


== HPC Basic Course - 2019-06-28==
* [https://public.anunna.wur.nl/hpc-courses/Linux-Basics.pdf Linux Basics]
* [https://public.anunna.wur.nl/hpc-courses/HPC-Basics.pdf HPC Basics]
* [https://public.anunna.wur.nl/hpc-courses/HPC-Advanced.pdf HPC Advanced]


A course for beginners was given on the 28th of June, aiming to help absolute beginners to begin to use the main job scheduler, SLURM.
== Self-study ==


== Linux Basic Course - 2019-06-27 ==
If you cannot attend a course, these resources let you learn at your own pace:


A course for beginners was given on the 13th of June, to help beginner Linux users gain some skills in using Linux.
* [[Linux Basic/Linux Self Assessment]] — check whether your command-line skills are ready for the HPC and container courses.
* [https://labex.io/linuxjourney Linux Journey] — self-paced Linux learning, with free practice virtual machines.
* [https://www.linux-path.com/en Linux Path] — a fork of Linux Journey with additional curated material.
* [https://carpentries.org Software Carpentry] — community lessons on many topics (for the command line, see Learn → Lessons → Unix shell).


== HPC CUDA/AI Course - 2019-06-21 ==
See also the [[Linux Basic]] page for more on the Linux fundamentals course.


A course for interested users for deep learning and neural networks, combined with some deep level manipulation of graphics cards was given by Dell on the 21st of July.
== Past course sessions ==


[[File:WUR_CUDA_210619.pdf|WUR CUDA Course]]
Slides from earlier course sessions are kept here for reference.
[[File:WUR_AI_101_210619.pdf|WUR AI Course 101]]
[[File:WUR_AI_201_210619.pdf|WUR AI Course 201]]


[[File:WUR_CUDA_2_210619.pdf|WUR CUDA Course]]
; 2025 — Linux Basics
[[File:WUR_Deep_Learning_Frameworks_210619.pdf|WUR Deep Learning Frameworks Primer]]
: [[:File:WUR Linux Basics Course Slides.pdf|Slides]]
[[File:WUR_Deep_Learning_Lab_210619.pdf|WUR Deep Learning Lab]]
; November 2021 — HPC Advanced
: [[:File:HPC advanced course 20211021.pdf|Slides 1]], [[:File:HPC advanced slides 20190528.pdf|Slides 2]]
; October 2021 — HPC Basic
: [[:File:HPC basic course 20211012.pdf|Slides]]
; June 2019 — HPC CUDA / AI (by Dell)
: [[:File:WUR CUDA 210619.pdf|CUDA]], [[:File:WUR CUDA 2 210619.pdf|CUDA 2]], [[:File:WUR AI 101 210619.pdf|AI 101]], [[:File:WUR AI 201 210619.pdf|AI 201]], [[:File:WUR Deep Learning Frameworks 210619.pdf|Deep Learning Frameworks]], [[:File:WUR Deep Learning Lab 210619.pdf|Deep Learning Lab]]
; November 2019 — HPC Basic
: [[:File:HPC basic course 20191111.pdf|Slides]]
; May 2019 — HPC Advanced
: [[:File:HPC advanced course 20190506.pdf|Slides 1]], [[:File:HPC advanced slides 20190528.pdf|Slides 2]]
; May 2019 — HPC Basic
: [[:File:HPC basic course 20190506.pdf|Slides]]
; October 2018 — HPC Advanced
: [[:File:HPC Advanced Slides 20181016.pdf|Slides 1]], [[:File:HPC advanced course 20181008.pdf|Slides 2]]
; October 2018 — HPC Basic
: [[:File:HPC basic course 20181008.pdf|Slides]]
; May 2018 — HPC Advanced
: [[:File:HPC Advanced 20180518-GD.pdf|Slides]]
; November 2017 — HPC Advanced
: [[:File:HPC Advanced course 2017-11-08-JV.pdf|Slides (Jeremie)]], [[:File:HPC Advanced course 2017-11-08-GD.pdf|Slides (Gwen)]], [[:File:Checkpointing 2017-11-08.pdf|Checkpointing]]
; October 2017 — HPC Basic
: [[:File:HPC basic course 20171025.pdf|Slides]]
; June 2017 — HPC Teaching
: [[:File:Connecting with Secure Shell to the HPC 20170606.pdf|Connecting with SSH]], [[:File:Submitting and monitoring jobs on the HPC 20170602.pdf|Submitting and monitoring jobs]]
; 2012 — Sequence Data Analysis Course
: [http://www.basgen.nl/sdac/ Course page]


== HPC Advanced Course - 2019-05-28 ==
== See also ==
 
* [[Workshops]]
A course for experienced users was organised on the 28th of May, aiming to brush up users on techniques for submitting unusual jobs, and help provide some more helpful hints and techniques.
* [[Tutorials]]
 
* [[2026 Course dates]]
[[File:HPC_advanced_course_20190506.pdf|Advanced Course 1]]
[[File:HPC_advanced_slides_20190528.pdf|Advanced Course 2]]
 
== HPC Basic Course - 2019-05-07 ==
 
A course for beginners will be organised on the 7th of May, aiming to help absolute beginners to begin to use the main job scheduler, SLURM.
 
[[File:HPC basic course 20190506.pdf|Basic Course]]
 
== Linux Basic Course - 2019-04-16 ==
 
A course for beginners was organised on the 16th of April, to help beginner Linux users gain some skills in using Linux.
 
== HPC Advanced Course - 2018-10-16 ==
 
A course for experienced users was organised on the 16th of October, aiming to brush up users on techniques for submitting unusual jobs, and help provide some more helpful hints and techniques.
 
[[File:HPC_Advanced_Slides_20181016.pdf|Advanced Course (Gwen)]]
 
[[File:HPC_advanced_course_20181008.pdf|Advanced Course (Jeremie)]]
 
== HPC Basic Course - 2018-10-11 ==
 
A course for beginners was organised on the 11th of October, aiming to help absolute beginners to begin to use the main job scheduler, SLURM.
 
[[File:HPC_basic_course_20181008.pdf|Basic Course]]
 
== Basic Linux Course - 2018-10-02 ==
 
A course basic Linux usage was organised on the 2nd of October, to help beginner Linux users gain some skills in using Linux.
 
[https://etherpad.lug.wur.nl/p/UpkF2KXDVh]
 
== HPC Advanced Course - 2018-05-18 ==
 
A course for experienced users was organised on the 18th of May, aiming to brush up users on techniques for submitting unusual jobs, and help provide some more helpful hints and techniques.
 
[[File:HPC_Advanced_20180518-GD.pdf|Advanced Course (Gwen)]]
 
== HPC Basic Course - 2018-05-17 ==
 
A course for beginners was organised on the 17th of May, aiming to help absolute beginners to begin to use the main job scheduler, SLURM.
 
== Basic Linux Course - 2018-04-19 ==
 
A course basic Linux usage was organised on the 19th of April, to help beginner Linux users gain some skills in using Linux.
 
== HPC Advanced Course - 2017-11-09 ==
 
A course for experienced users was organised on the 9th of November, aiming to brush up users on techniques for submitting unusual jobs, and help provide some more helpful hints and techniques.
 
[[File:HPC_Advanced_course_2017-11-08-JV.pdf|Advanced Course (Jeremie)]]
 
[[File:HPC_Advanced_course_2017-11-08-GD.pdf|Advanced Course (Gwen)]]
 
[[File:Checkpointing_2017-11-08.pdf|Checkpointing]]
 
== HPC Basic Course - 2017-10-30 ==
 
A course for beginners was organised on the 30th of October, aiming to help absolute beginners to enhance their ability to use the main job scheduler, SLURM.
 
The slides for this course can be found here:
 
[[File:HPC_basic_course_20171025.pdf | Basic introduction to Linux]]
 
== HPC Teaching - 2017-06-07 ==
 
A course for was organised on the 7th of June, aiming to help absolute beginners (and moderately experienced users) to enhance their ability to use the main job scheduler, SLURM.
 
The slides for this course can be found here:
 
[[File:Connecting_with_Secure_Shell_to_the_HPC_20170606.pdf | Basic introduction to Linux]]
 
[[File:Submitting_and_monitoring_jobs_on_the_HPC_20170602.pdf | Submitting and Monitoring Jobs]]
 
== Old Courses ==
* [http://www.basgen.nl/sdac/ Sequence Data Analysis Course (Dec. 2012)]

Latest revision as of 14:40, 18 June 2026

This page collects slides and self-study material for working on Anunna. To attend an instructor-led course, see Workshops and 2026 Course dates; for hands-on tutorials, see Tutorials.

Latest course slides

The most recent slides for the three regular courses:

Self-study

If you cannot attend a course, these resources let you learn at your own pace:

  • Linux Basic/Linux Self Assessment — check whether your command-line skills are ready for the HPC and container courses.
  • Linux Journey — self-paced Linux learning, with free practice virtual machines.
  • Linux Path — a fork of Linux Journey with additional curated material.
  • Software Carpentry — community lessons on many topics (for the command line, see Learn → Lessons → Unix shell).

See also the Linux Basic page for more on the Linux fundamentals course.

Past course sessions

Slides from earlier course sessions are kept here for reference.

2025 — Linux Basics
Slides
November 2021 — HPC Advanced
Slides 1, Slides 2
October 2021 — HPC Basic
Slides
June 2019 — HPC CUDA / AI (by Dell)
CUDA, CUDA 2, AI 101, AI 201, Deep Learning Frameworks, Deep Learning Lab
November 2019 — HPC Basic
Slides
May 2019 — HPC Advanced
Slides 1, Slides 2
May 2019 — HPC Basic
Slides
October 2018 — HPC Advanced
Slides 1, Slides 2
October 2018 — HPC Basic
Slides
May 2018 — HPC Advanced
Slides
November 2017 — HPC Advanced
Slides (Jeremie), Slides (Gwen), Checkpointing
October 2017 — HPC Basic
Slides
June 2017 — HPC Teaching
Connecting with SSH, Submitting and monitoring jobs
2012 — Sequence Data Analysis Course
Course page

See also

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