RStudio: Difference between revisions
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The '''RStudio integrated development environment (IDE | The '''RStudio''' integrated development environment (IDE) is a set of tools built to help you be more productive with R and Python. | ||
[[File:RStudio-form-20260225.png|thumb|595x595px|Resource Allocation Form]] | [[File:RStudio-form-20260225.png|thumb|595x595px|Resource Allocation Form]] | ||
RStudio is built with the aid of EasyBuild and makes use of the relevant R modules available at Anunna. | RStudio is built with the aid of EasyBuild and makes use of the relevant R modules available at Anunna. It is available through the [[Portal Overview|Apps Portal]] (https://apps.anunna.wur.nl/). | ||
RStudio can be found both in the All Applications menu in the navigation bar and as a button in the Featured Apps speed dial. Clicking either option takes you to a form where you can allocate resources for your RStudio session. | |||
== Resource allocation form == | |||
The resource allocation form | The resource allocation form lets you select the following options: | ||
* R version | * '''R version''' | ||
* Partition: main by default but the GPU partition is available | * '''Partition''': <code>main</code> by default, but the GPU partition is available | ||
* Number of | * '''Number of hours''': maximum 4 hours | ||
* Number of CPUs: CPU cores available | * '''Number of CPUs''': CPU cores available | ||
* Memory : | * '''Memory''': amount of RAM | ||
* Number of GPUs: | * '''Number of GPUs''': zero by default; switch this to at least 1 to use a GPU | ||
** Note that the GPU partition must be selected | ** Note that the GPU partition must be selected | ||
* Comment: | * '''Comment''': project number that will show up on your bill | ||
* | * '''SLURM options''': SLURM flag overrides | ||
== Connecting to an active session == | |||
Once the form has been filled, | Once the form has been filled in, click the '''Launch''' button. The screen switches to the interactive sessions page, where the new session is listed. | ||
Once the session is ready a | Once the session is ready, a '''Connect to RStudio Server''' button appears, which lets you (re)connect to the active session. The card also has a red '''Cancel''' button to terminate your session. | ||
[[File:RStudio-connect-20260225.png|center|thumb|509x509px|RStudio active session card at My Interactive Sessions]] | |||
== See also == | |||
[[ | * [[Portal Overview]] | ||
* [[R]] | |||
* [[Jupyter]] | |||
Latest revision as of 12:33, 18 June 2026
The RStudio integrated development environment (IDE) is a set of tools built to help you be more productive with R and Python.
RStudio is built with the aid of EasyBuild and makes use of the relevant R modules available at Anunna. It is available through the Apps Portal (https://apps.anunna.wur.nl/).
RStudio can be found both in the All Applications menu in the navigation bar and as a button in the Featured Apps speed dial. Clicking either option takes you to a form where you can allocate resources for your RStudio session.
Resource allocation form
The resource allocation form lets you select the following options:
- R version
- Partition:
mainby default, but the GPU partition is available - Number of hours: maximum 4 hours
- Number of CPUs: CPU cores available
- Memory: amount of RAM
- Number of GPUs: zero by default; switch this to at least 1 to use a GPU
- Note that the GPU partition must be selected
- Comment: project number that will show up on your bill
- SLURM options: SLURM flag overrides
Connecting to an active session
Once the form has been filled in, click the Launch button. The screen switches to the interactive sessions page, where the new session is listed.
Once the session is ready, a Connect to RStudio Server button appears, which lets you (re)connect to the active session. The card also has a red Cancel button to terminate your session.
