MAFFT 7.130 - Revision history

Prins0891: to

 to fix code blocks

2023-06-15T13:49:30Z

<source> to <pre> to fix code blocks

← Older revision		Revision as of 15:49, 15 June 2023
Line 5:		Line 5:
	/cm/shared/modulefiles/SHARED/		/cm/shared/modulefiles/SHARED/

	<~~source lang='tcl'~~>		<pre>
	#%Module1.0#######################################################################		#%Module1.0#######################################################################
	## MAFFT 7.130 modulefile		## MAFFT 7.130 modulefile
Line 23:		Line 23:
	prepend-path PATH $mafft_7_root		prepend-path PATH $mafft_7_root

	</~~source~~>		</pre>

	== Installation details ==		== Installation details ==
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	<source lang='bash'>		<source lang='bash'>
	wget http://mafft.cbrc.jp/alignment/software/mafft-7.130-with-extensions-src.tgz		wget http://mafft.cbrc.jp/alignment/software/mafft-7.130-with-extensions-src.tgz
	</~~source~~>		</pre>

	== See also ==		== See also ==

Megen002: /* External links */

2014-03-15T18:17:28Z

External links

← Older revision		Revision as of 20:17, 15 March 2014
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	== External links ==		== External links ==
	* [http://~~drive5~~.~~com~~/~~muscle~~/ ~~MUSCLE~~ home page]		* [http://mafft.cbrc.jp/alignment/software/ MAFFT home page]

Megen002: /* Installation details */

2014-03-15T18:13:20Z

Installation details

← Older revision		Revision as of 20:13, 15 March 2014
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	== Installation details ==		== Installation details ==

	Downloaded as ~~pre-compiled binary~~:		Downloaded as source:
	http://~~www~~.~~drive5~~.~~com~~/~~muscle~~/~~downloads3~~.8.31/~~muscle3.8.31_i86linux64.tar.gz~~		<source lang='bash'>
			wget http://mafft.cbrc.jp/alignment/software/mafft-7.130-with-extensions-src.tgz
			</source>

	== See also ==		== See also ==

Megen002: Created page with "'''[http://mafft.cbrc.jp/alignment/software/ MAFFT]''' is a multiple sequence alignment program for unix-like operating systems. It offers a range of multiple alignment metho..."

2014-03-15T18:11:00Z

Created page with "'''[http://mafft.cbrc.jp/alignment/software/ MAFFT]''' is a multiple sequence alignment program for unix-like operating systems. It offers a range of multiple alignment metho..."

New page

'''[http://mafft.cbrc.jp/alignment/software/ MAFFT]''' is a multiple sequence alignment program for unix-like operating systems. It offers a range of multiple alignment methods, L-INS-i (accurate; for alignment of <∼200 sequences), FFT-NS-2 (fast; for alignment of <∼10,000 sequences), etc.

== Module file ==
The module file can be found in this location:
/cm/shared/modulefiles/SHARED/

<source lang='tcl'>
#%Module1.0#######################################################################
## MAFFT 7.130 modulefile
##
proc ModulesHelp { } {

puts stderr "\tAdds MAFFT 7.130 to your environment"
}

module-whatis "Adds MAFFT 7.130 to your environment"

setenv MAFFT_BINARIES /cm/shared/apps/SHARED/MAFFT/mafft-7.130-with-extensions/binaries

set mafft_7_root /cm/shared/apps/SHARED/MAFFT/mafft-7.130-with-extensions/bin

prepend-path PATH $mafft_7_root

</source>

== Installation details ==

Downloaded as pre-compiled binary:
http://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_i86linux64.tar.gz

== See also ==
* [[Globally_installed_software | Globally installed software]]
* [[ABGC_modules | ABGC specific modules]]

== External links ==
* [http://drive5.com/muscle/ MUSCLE home page]