Bwa 7.5 - Revision history

Megen002: /* Module file */

2014-03-15T08:57:53Z

Module file

← Older revision		Revision as of 10:57, 15 March 2014
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	== Module file ==		== Module file ==
	The module file can be found in this location:		The module file can be found in this location:
	/cm/shared/~~apps~~/~~WUR~~/~~ABGC/modulefiles~~		/cm/shared/modulefiles/SHARED/

	<source lang='tcl'>		<source lang='tcl'>
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	module-whatis "Adds bwa v0.7.5a to your environment"		module-whatis "Adds bwa v0.7.5a to your environment"

	set bwa_075a_root /cm/shared/apps/~~WUR/ABGC~~/bwa/bwa-0.7.5a		set bwa_075a_root /cm/shared/apps/SHARED/bwa/bwa-0.7.5a

	prepend-path PATH $bwa_075a_root		prepend-path PATH $bwa_075a_root
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	</source>		</source>


	== See also ==		== See also ==

Megen002: /* See also */

2013-12-21T10:44:50Z

Megen002: /* Module file */

2013-12-21T10:43:29Z

Module file

← Older revision		Revision as of 12:43, 21 December 2013
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	<source lang='tcl'>		<source lang='tcl'>
	#%Module1.0#######################################################################		#%Module1.0#######################################################################
	## bwa 0.5.9 modulefile		## bwa 0.7.5a modulefile
	##		##
	proc ModulesHelp { } {		proc ModulesHelp { } {

	puts stderr "\tAdds bwa v0.5.9 to your environment"		puts stderr "\tAdds bwa v0.7.5a to your environment"
	}		}

	module-whatis "Adds bwa v0.5.9 to your environment"		module-whatis "Adds bwa v0.7.5a to your environment"

	set ~~bwa_059_root~~ /cm/shared/apps/WUR/ABGC/bwa/bwa-0.5.9/		set bwa_075a_root /cm/shared/apps/WUR/ABGC/bwa/bwa-0.7.5a

			prepend-path PATH $bwa_075a_root

	~~prepend-path PATH $bwa_059_root~~

	</source>		</source>

Megen002 at 10:41, 21 December 2013

2013-12-21T10:41:52Z

← Older revision		Revision as of 12:41, 21 December 2013
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	== See also ==		== See also ==
	* [[Globally_installed_software \| Globally installed software]]
	* [[ABGC_modules \| ABGC specific modules]]

	== External links ==		== External links ==
	* [http://bio-bwa.sourceforge.net/bwa.shtml BWA manpage]		* [http://bio-bwa.sourceforge.net/bwa.shtml BWA manpage]

Megen002: /* See also */

2013-12-21T10:41:29Z

Megen002 at 10:40, 21 December 2013

2013-12-21T10:40:24Z

← Older revision		Revision as of 12:40, 21 December 2013
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	BWA is a short read aligner designed by Heng Li and currently the most widely used aligner for re-sequencing analysis.		[http://en.wikipedia.org/wiki/Burrows-Wheeler_Aligner#Short-Read_Sequence_Alignment BWA] is a short read aligner designed by Heng Li and currently the most widely used aligner for re-sequencing analysis.

	== Module file ==		== Module file ==

Megen002: Created page with "BWA is a short read aligner designed by Heng Li and currently the most widely used aligner for re-sequencing analysis. == Module file == The module file can be found in this ..."

2013-12-21T10:38:42Z

Created page with "BWA is a short read aligner designed by Heng Li and currently the most widely used aligner for re-sequencing analysis. == Module file == The module file can be found in this ..."

New page

BWA is a short read aligner designed by Heng Li and currently the most widely used aligner for re-sequencing analysis.

== Module file ==
The module file can be found in this location:
/cm/shared/apps/WUR/ABGC/modulefiles

<source lang='tcl'>
#%Module1.0#######################################################################
## bwa 0.5.9 modulefile
##
proc ModulesHelp { } {

puts stderr "\tAdds bwa v0.5.9 to your environment"
}

module-whatis "Adds bwa v0.5.9 to your environment"

set bwa_059_root /cm/shared/apps/WUR/ABGC/bwa/bwa-0.5.9/

prepend-path PATH $bwa_059_root

</source>

== See also ==

== External links ==
* [http://bio-bwa.sourceforge.net/bwa.shtml BWA manpage]

← Older revision		Revision as of 12:44, 21 December 2013
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	</source>		</source>


	== See also ==		== See also ==
			* [[Globally_installed_software \| Globally installed software]]
			* [[ABGC_modules \| ABGC specific modules]]

	== External links ==		== External links ==
	* [http://bio-bwa.sourceforge.net/bwa.shtml BWA manpage]		* [http://bio-bwa.sourceforge.net/bwa.shtml BWA manpage]