HPCwiki - User contributions [en]

Node usage graph

2025-03-28T13:37:59Z

Munoz014:

There is a graphing tool that uses elements directly from sacct to display information about the current cluster usage, node_usage_graph (located at in the anunna module ).

Example:
<pre>
[user@login0 ~]# module load anunna
[user@login0 ~]# usage_graph
node: |0% 100%|
fat001: DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
fat002: CCCCCCCCC
MMMMMmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmm
node001:

node002:cccccccccc
MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMmmmmmmmmmm
node003:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MM
node004:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
M
node005:CCCCCCCCCC

node006:CCCCCCCCCC

node007:CCCCCCCCCC

node008:CCCCCCCCCCccccc
MMMMMMMMMMMMMMMMMMMMM
node009:cccccccccc
MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
node010:

node011:

node012:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
M
node013:

node014:

node015:CCCCC
MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmm
node016:CCCCCCCCCCCCCCCCCCCCC
MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmm
node017:

node018:

node019:CCCCC
MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmmm
node020:

node021:

node022:

node023:

node024:CCCCCCCCCCCCCCC

node025:CCCCCCCCCCCCCCCCCCCCC

node026:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

node027:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

node028:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MMM
node029:

node030:

node031:

node032:

node033:

node034:

node035:

node036:

node037:

node038:

node039:

node040:DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
node041:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
MMMMMMMMMMMMMMMMMMMMMM
node042:RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
node049:DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
node050:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
M
node051:

node052:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
MMMMMMmmmmmmmmmmmmmmm
node053:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
M
node054:DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
</pre>

This gives an overview of the current per-node resource usage. There are four types of letter:
* M: Memory reserved and in use
* m: Memory reserved and not in use
* C: CPU reserved and in use
* c: CPU reserved and not in use
* D: Drained node (not available for job submission)
* R: Reserved node
* P: Node is powered off (for energy-saving)

It cannot however give you an indication of how much the queue is right now for any node. for that, squeue is a better resource.

User:Munoz014

2025-02-14T13:46:57Z

Munoz014:

[[File:RM_profile_micro.jpg|right|Description = Rodrigo Muñoz performing fieldwork in the Lacandona rainforest, Mexico.]]
== Rodrigo Muñoz ==

Researcher at the Sustainable Forest Ecosystems team, Wageningen Environmental Research.

* Profile on [https://www.wur.nl/en/persons/rodrigo-munoz-aviles-1.htm WUR website]
* Profile on [https://www.linkedin.com/in/rodrigo-munoz-aviles/ LinkedIn]
* Profile on [https://scholar.google.com/citations?user=-fE09NwAAAAJ&hl=en Google Scholar]

== Brief bio ==

Rodrigo Muñoz is a Mexican ecologist with a specialization in the study of forests and their drivers of change. His research interests encompass a wide range, from tree physiology and anatomy to comprehensive comparisons of forest ecosystems across the world. Currently, he performs as Researcher at Wageningen Environmental Research, with a focus in modelling the dynamics of European forests, and using this information to advise the activities of a broad range of stakeholders: from scientific researchers to the industry to policy and decision makers.

== Ongoing projects ==
* Modelling of European forest dynamics (EFISCEN-Space)
* Understanding the drivers of forest change in Europe and the Latin American tropics
* Identification of forestry sector information needs Europe-wide (MoniFun)

== Why am I using the HPC? ==
Making projections of the state and change of European forests requires an enormous computational power. Currently, we use a dataset encompassing 18 European countries, with millions of trees. Hence, the HPC offers a great solution to our computing requirements, significantly reducing the time required to make our forest projections.

User:Munoz014

2025-02-14T13:44:27Z

Munoz014:

== Rodrigo Muñoz ==
[[File:RM_profile_micro.jpg|right]]
Researcher at the Sustainable Forest Ecosystems team, Wageningen Environmental Research.

* Profile on [https://www.wur.nl/en/persons/rodrigo-munoz-aviles-1.htm WUR website]
* Profile on [https://www.linkedin.com/in/rodrigo-munoz-aviles/ LinkedIn]
* Profile on [https://scholar.google.com/citations?user=-fE09NwAAAAJ&hl=en Google Scholar]

== Brief bio ==

Rodrigo Muñoz is a Mexican ecologist with a specialization in the study of forests and their drivers of change. His research interests encompass a wide range, from tree physiology and anatomy to comprehensive comparisons of forest ecosystems across the world. Currently, he performs as Researcher at Wageningen Environmental Research, with a focus in modelling the dynamics of European forests, and using this information to advise the activities of a broad range of stakeholders: from scientific researchers to the industry to policy and decision makers.

== Ongoing projects ==
* Modelling of European forest dynamics (EFISCEN-Space)
* Understanding the drivers of forest change in Europe and the Latin American tropics
* Identification of forestry sector information needs Europe-wide (MoniFun)

== Why am I using the HPC? ==
Making projections of the state and change of European forests requires an enormous computational power. Currently, we use a dataset encompassing 18 European countries, with millions of trees. Hence, the HPC offers a great solution to our computing requirements, significantly reducing the time required to make our forest projections.

File:RM profile micro.jpg

2025-02-14T13:43:41Z

Munoz014: Rodrigo Muñoz profile picture

== Summary ==
Rodrigo Muñoz profile picture

User:Munoz014

2025-02-14T13:02:09Z

Munoz014:

== Rodrigo Muñoz ==
[[File:Rodrigo_Munoz_profile.jpg|right]]
Researcher at the Sustainable Forest Ecosystems team, Wageningen Environmental Research.

* Profile on [https://www.wur.nl/en/persons/rodrigo-munoz-aviles-1.htm WUR website]
* Profile on [https://www.linkedin.com/in/rodrigo-munoz-aviles/ LinkedIn]
* Profile on [https://scholar.google.com/citations?user=-fE09NwAAAAJ&hl=en Google Scholar]

== Brief bio ==

Rodrigo Muñoz is a Mexican ecologist with a specialization in the study of forests and their drivers of change. His research interests encompass a wide range, from tree physiology and anatomy to comprehensive comparisons of forest ecosystems across the world. Currently, he performs as Researcher at Wageningen Environmental Research, with a focus in modelling the dynamics of European forests, and using this information to advise the activities of a broad range of stakeholders: from scientific researchers to the industry to policy and decision makers.

== Ongoing projects ==
* Modelling of European forest dynamics (EFISCEN-Space)
* Understanding the drivers of forest change in Europe and the Latin American tropics
* Identification of forestry sector information needs Europe-wide (MoniFun)

== Why am I using the HPC? ==
Making projections of the state and change of European forests requires an enormous computational power. Currently, we use a dataset encompassing 18 European countries, with millions of trees. Hence, the HPC offers a great solution to our computing requirements, significantly reducing the time required to make our forest projections.

User:Munoz014

2025-02-14T13:01:55Z

Munoz014:

== Rodrigo Muñoz ==
[[File:Rodrigo_Munoz_profile|right]]
Researcher at the Sustainable Forest Ecosystems team, Wageningen Environmental Research.

* Profile on [https://www.wur.nl/en/persons/rodrigo-munoz-aviles-1.htm WUR website]
* Profile on [https://www.linkedin.com/in/rodrigo-munoz-aviles/ LinkedIn]
* Profile on [https://scholar.google.com/citations?user=-fE09NwAAAAJ&hl=en Google Scholar]

== Brief bio ==

Rodrigo Muñoz is a Mexican ecologist with a specialization in the study of forests and their drivers of change. His research interests encompass a wide range, from tree physiology and anatomy to comprehensive comparisons of forest ecosystems across the world. Currently, he performs as Researcher at Wageningen Environmental Research, with a focus in modelling the dynamics of European forests, and using this information to advise the activities of a broad range of stakeholders: from scientific researchers to the industry to policy and decision makers.

== Ongoing projects ==
* Modelling of European forest dynamics (EFISCEN-Space)
* Understanding the drivers of forest change in Europe and the Latin American tropics
* Identification of forestry sector information needs Europe-wide (MoniFun)

== Why am I using the HPC? ==
Making projections of the state and change of European forests requires an enormous computational power. Currently, we use a dataset encompassing 18 European countries, with millions of trees. Hence, the HPC offers a great solution to our computing requirements, significantly reducing the time required to make our forest projections.

File:Rodrigo Munoz profile.jpg

2025-02-14T12:59:49Z

Munoz014: Profile picture of Rodrigo Muñoz, WENR SFE

== Summary ==
Profile picture of Rodrigo Muñoz, WENR SFE

User:Munoz014

2025-02-14T12:53:49Z

Munoz014: /* Rodrigo Muñoz */

== Rodrigo Muñoz ==

Researcher at the Sustainable Forest Ecosystems team, Wageningen Environmental Research.

* Profile on [https://www.wur.nl/en/persons/rodrigo-munoz-aviles-1.htm WUR website]
* Profile on [https://www.linkedin.com/in/rodrigo-munoz-aviles/ LinkedIn]
* Profile on [https://scholar.google.com/citations?user=-fE09NwAAAAJ&hl=en Google Scholar]

== Brief bio ==

Rodrigo Muñoz is a Mexican ecologist with a specialization in the study of forests and their drivers of change. His research interests encompass a wide range, from tree physiology and anatomy to comprehensive comparisons of forest ecosystems across the world. Currently, he performs as Researcher at Wageningen Environmental Research, with a focus in modelling the dynamics of European forests, and using this information to advise the activities of a broad range of stakeholders: from scientific researchers to the industry to policy and decision makers.

== Ongoing projects ==
* Modelling of European forest dynamics (EFISCEN-Space)
* Understanding the drivers of forest change in Europe and the Latin American tropics
* Identification of forestry sector information needs Europe-wide (MoniFun)

== Why am I using the HPC? ==
Making projections of the state and change of European forests requires an enormous computational power. Currently, we use a dataset encompassing 18 European countries, with millions of trees. Hence, the HPC offers a great solution to our computing requirements, significantly reducing the time required to make our forest projections.

User:Munoz014

2025-02-14T12:53:19Z

Munoz014:

== Rodrigo Muñoz ==

* Profile on [https://www.wur.nl/en/persons/rodrigo-munoz-aviles-1.htm WUR website]
* Profile on [https://www.linkedin.com/in/rodrigo-munoz-aviles/ LinkedIn]
* Profile on [https://scholar.google.com/citations?user=-fE09NwAAAAJ&hl=en Google Scholar]

''' Role at Wageningen University & Research: ''' Researcher at the Sustainable Forest Ecosystems team, Wageningen Environmental Research.

== Brief bio ==

Rodrigo Muñoz is a Mexican ecologist with a specialization in the study of forests and their drivers of change. His research interests encompass a wide range, from tree physiology and anatomy to comprehensive comparisons of forest ecosystems across the world. Currently, he performs as Researcher at Wageningen Environmental Research, with a focus in modelling the dynamics of European forests, and using this information to advise the activities of a broad range of stakeholders: from scientific researchers to the industry to policy and decision makers.

== Ongoing projects ==
* Modelling of European forest dynamics (EFISCEN-Space)
* Understanding the drivers of forest change in Europe and the Latin American tropics
* Identification of forestry sector information needs Europe-wide (MoniFun)

== Why am I using the HPC? ==
Making projections of the state and change of European forests requires an enormous computational power. Currently, we use a dataset encompassing 18 European countries, with millions of trees. Hence, the HPC offers a great solution to our computing requirements, significantly reducing the time required to make our forest projections.

User:Munoz014

2025-02-14T12:19:28Z

Munoz014:

== Rodrigo Muñoz ==

* Profile on [https://www.wur.nl/en/persons/rodrigo-munoz-aviles-1.htm WUR website]
* Profile on [https://www.linkedin.com/in/rodrigo-munoz-aviles/ LinkedIn]
* Profile on [https://scholar.google.com/citations?user=-fE09NwAAAAJ&hl=en Google Scholar]

'''Role at Wageningen University & Research'''
Researcher at the Sustainable Forest Ecosystems team, Wageningen Environmental Research.

== Brief bio ==

Rodrigo Muñoz is a Mexican ecologist with a specialization in the study of forests and their drivers of change. His research interests encompass a wide range, from tree physiology and anatomy to comprehensive comparisons of forest ecosystems across the world. Currently, he performs as Researcher at Wageningen Environmental Research, with a focus in modelling the dynamics of European forests, and using this information to advise the activities of a broad range of stakeholders: from scientific researchers to the industry to policy and decision makers.

== Ongoing projects ==
* Modelling of European forest dynamics (EFISCEN-Space)
* Understanding the drivers of forest change in Europe and the Latin American tropics
* Identification of forestry sector information needs Europe-wide (MoniFun)

== Why am I using the HPC? ==
Making projections of the state and change of European forests requires an enormous computational power. Currently, we use a dataset encompassing 18 European countries, with millions of trees. Hence, the HPW offers a great solution to our computing requirements, significantly reducing the time required to make our forest projections.

User:Munoz014

2025-02-14T12:17:44Z

Munoz014: /* Rodrigo Muñoz */

== Rodrigo Muñoz ==

* Profile on [https://www.wur.nl/en/persons/rodrigo-munoz-aviles-1.htm WUR website]
* Profile on [https://www.linkedin.com/in/rodrigo-munoz-aviles/ LinkedIn]
* Profile on [https://scholar.google.com/citations?user=-fE09NwAAAAJ&hl=en Google Scholar]

Researcher at the Sustainable Forest Ecosystems team, Wageningen Environmental Research.

'''Brief bio'''

Rodrigo Muñoz is a Mexican ecologist with a specialization in the study of forests and their drivers of change. His research interests encompass a wide range, from tree physiology and anatomy to comprehensive comparisons of forest ecosystems across the world. Currently, he performs as Researcher at Wageningen Environmental Research, with a focus in modelling the dynamics of European forests, and using this information to advise the activities of a broad range of stakeholders: from scientific researchers to the industry to policy and decision makers.

'''Ongoing projects'''
* Modelling of European forest dynamics (EFISCEN-Space)
* Understanding the drivers of forest change in Europe and the Latin American tropics
* Identification of forestry sector information needs Europe-wide (MoniFun)

'''Why am I using the HPC?'''
Making projections of the state and change of European forests requires an enormous computational power. Currently, we use a dataset encompassing 18 European countries, with millions of trees. Hence, the HPW offers a great solution to our computing requirements, significantly reducing the time required to make our forest projections.

User:Munoz014

2025-02-14T12:17:21Z

Munoz014: Created page with "== Rodrigo Muñoz == * Profile on [https://www.wur.nl/en/persons/rodrigo-munoz-aviles-1.htm WUR website] * Profile on [https://www.linkedin.com/in/rodrigo-munoz-aviles/ LinkedIn] * Profile on [https://scholar.google.com/citations?user=-fE09NwAAAAJ&hl=en Google Scholar] Researcher at the Sustainable Forest Ecosystems team, Wageningen Environmental Research. '''Brief bio''' Rodrigo Muñoz is a Mexican ecologist with a specialization in the study of forests and their dri..."

== Rodrigo Muñoz ==

* Profile on [https://www.wur.nl/en/persons/rodrigo-munoz-aviles-1.htm WUR website]
* Profile on [https://www.linkedin.com/in/rodrigo-munoz-aviles/ LinkedIn]
* Profile on [https://scholar.google.com/citations?user=-fE09NwAAAAJ&hl=en Google Scholar]

Researcher at the Sustainable Forest Ecosystems team, Wageningen Environmental Research.

'''Brief bio'''
Rodrigo Muñoz is a Mexican ecologist with a specialization in the study of forests and their drivers of change. His research interests encompass a wide range, from tree physiology and anatomy to comprehensive comparisons of forest ecosystems across the world. Currently, he performs as Researcher at Wageningen Environmental Research, with a focus in modelling the dynamics of European forests, and using this information to advise the activities of a broad range of stakeholders: from scientific researchers to the industry to policy and decision makers.

'''Ongoing projects'''
* Modelling of European forest dynamics (EFISCEN-Space)
* Understanding the drivers of forest change in Europe and the Latin American tropics
* Identification of forestry sector information needs Europe-wide (MoniFun)

'''Why am I using the HPC?'''
Making projections of the state and change of European forests requires an enormous computational power. Currently, we use a dataset encompassing 18 European countries, with millions of trees. Hence, the HPW offers a great solution to our computing requirements, significantly reducing the time required to make our forest projections.

List of users

2025-02-13T20:33:39Z

Munoz014: /* Active users */

== Active users ==

List of users. Alphabetical order (last/family name). Provide some background information by adding information to the 'User:username' page.

* [[User:Barris01 | Wes Barris (Cobb)]]
* [[User:Basti015 | John Bastiaansen (WUR/ABGC)]]
* [[User:Binsb003 | Rianne van Binsbergen (WUR/ABGC)]]
* [[User:Bosse014 | Mirte Bosse (WUR/ABGC)]]
* [[User:Bouwm024 | Aniek Bouwman (WUR/ABGC)]]
* [[User:Brasc001 | Pim Brascamp (WUR/ABGC)]]
* [[User:Calus001 | Mario Calus (WUR/ABGC)]]
* [[User:dongen01 | Henk van Dongen (TOPIGS)]]
* [[User:Frans004 | Wietse Franssen (WUR/ESG)]]
* [[User:Haars001 | Jan van Haarst (WUR/PRI)]]
* [[User:Hulse002 | Ina Hulsegge (WUR/ABGC)]]
* [[User:Hulze001 | Alex Hulzebosch (WUR/ABGC)]]
* [[User:Lopes01 | Marcos Soares Lopes (TOPIGS)]]
* [[User:Madse001 | Ole Madsen (WUR/ABGC)]]
* [[User:Megen002 | Hendrik-Jan Megens (WUR/ABGC)]]
* [[User:munoz014| Rodrigo Muñoz (WUR/ESG)]]
* [[User:Nijve002 | Harm Nijveen (WUR/Bioinformatics)]]
* [[User:Schroo01 | Chris Schrooten (CRV)]]
* [[User:Schur010 | Anouk Schurink (WUR/ABGC)]]
* [[User:Smit089 | Sandra Smit (WUR/Bioinformatics)]]
* [[User:Vande018 | Jeremie Vandenplas (WUR/ABGC)]]
* [[User:Veerk001 | Roel Veerkamp (WUR/ABGC)]]
* [[User:Vereij01 | Addie Vereijken (Hendrix Genetics)]]
* [[User:derks047 | Martijn Derks (WUR/ABGC)]]

== FB-ICT Management of the HPC ==

* [[User:Dawes001 | Gwen Dawes (WUR, FB-IT) - HPC System Adiministrator]]
* [[User:Janss115 | Stephen Janssen (WUR, FB-IT, Service Management)]]
* [[User:pollm001 | Koen Pollmann (WUR, FB-IT, Infrastructure)]]

== Alumni ==
* [[User:Bohme001 | Andre ten Böhmer (WUR, FB-IT, Infrastructure)]]
* [[User:Frant001 | Laurent Frantz (WUR/ABGC)]]
* [[User:Herrer01 | Juanma Herrero (WUR/ABGC)]]
* [[User:paude004 | Yogesh Paudel (WUR/ABGC)]]