HPCwiki - User contributions [en]

CLC

2026-06-08T11:31:38Z

Lee006: added the part on the licencing, now a single group and how to add and renove users

For some groups within WUR, Anunna hosts a CLC Genomics Server instance.
We do the technical support, functional support is done by the groups themselves.
So please contact Sven Warris or Theo van der Lee first in case of issues.

The current version of our CLC installation is: '''26.0.2'''

CLC is only available through VPN.

__TOC__

=== CLC Genomics Workbench download ===
The CLC client is the CLC Genomics Workbench. The client can be downloaded from the website of Qiagen:

https://digitalinsights.qiagen.com/products/clc-genomics-workbench-direct-download/

=== CLC License Server Connection ===

If you need to use the CLC license server, these are the credentials for that:

Hostname: clc.anunna.wur.nl

Port: 6200

Username : your WUR username (not haars001)

[[File:CLC License server credentials.png|400px|CLC license server connection credentials]]

=== CLC Server Connection ===

CLC Server Connection credentials:

Server name: clc.anunna.wur.nl

Port: 7777

Username and password are your WUR credentials:

[[File:CLC server credentials.png|400px|CLC Server connection credentials]]

=== CLC Data Management ===

On the old server there was about 100TB of data in use.
To force everybody to think about what they need for their day to day work, it was decided to make the old data available readonly through the OLD_[groupname] folders.

If you need data from the old location, you can copy it to to your group folder.
The data transfer is done on the server, but it might still take a while to finish.

=== CLC User management ===

Access to the CLC server, floating (network) licenses and data access is all managed through groups in the Active Directory.

Managing this on Windows can be done through the "Find Users, Contacts and Groups" application, it is also available for Linux and Mac through https://workspace.wur.nl/

== Access ==

Everybody who is a member of RES_CLC_Allowed_Users can use the CLC server. You can also add user groups here.

== Licenses ==

There are two groups:

* RES_CLCGENOMICSWORKBENCH

The content of these groups is automatically synced every hour with the CLC license server.
[[File:Image.png|thumb|PROVIDE ACCESS BY MANAGERS]]

Group managers can provide access via link find users contacts and groups.

Group members can be added or removed via the e-mail account.

== Data access ==

The access to folders and data on the CLC server is also managed through groups in the Active Directory.
The following groups are present, and these groups can access their relevant folders:
* RES_CLC_Applied_Bioinformatics
* RES_CLC_Bio_Interactions
* RES_CLC_Bioscience
* RES_CLC_Biosystematics
* RES_CLC_Genetics
* RES_CLC_genomes_and_databases
* RES_CLC_Molecular_Biology
* RES_CLC_Plant_Breeding
* RES_CLC_Plant_Physiology
* RES_CLC_WUR-customer-data

Administrators can use the CLC GUI and [https://clc.anunna.wur.nl:7777 web interface] to change the settings for the folders on the server.

File:Image.png

2026-06-08T11:18:32Z

Lee006:

manage access

CLC

2026-06-02T14:04:51Z

Lee006: changed the CLC genomic workbench version to 26.02

For some groups within WUR, Anunna hosts a CLC Genomics Server instance.
We do the technical support, functional support is done by the groups themselves.
So please contact Sven Warris or Theo van der Lee first in case of issues.

The current version of our CLC installation is: '''26.0.2'''

CLC is only available through VPN.

__TOC__

=== CLC Genomics Workbench download ===
The CLC client is the CLC Genomics Workbench. The client can be downloaded from the website of Qiagen:

https://digitalinsights.qiagen.com/products/clc-genomics-workbench-direct-download/

=== CLC License Server Connection ===

If you need to use the CLC license server, these are the credentials for that:

Hostname: clc.anunna.wur.nl

Port: 6200

Username : your WUR username (not haars001)

[[File:CLC License server credentials.png|400px|CLC license server connection credentials]]

=== CLC Server Connection ===

CLC Server Connection credentials:

Server name: clc.anunna.wur.nl

Port: 7777

Username and password are your WUR credentials:

[[File:CLC server credentials.png|400px|CLC Server connection credentials]]

=== CLC Data Management ===

On the old server there was about 100TB of data in use.
To force everybody to think about what they need for their day to day work, it was decided to make the old data available readonly through the OLD_[groupname] folders.

If you need data from the old location, you can copy it to to your group folder.
The data transfer is done on the server, but it might still take a while to finish.

=== CLC User management ===

Access to the CLC server, floating (network) licenses and data access is all managed through groups in the Active Directory.

Managing this on Windows can be done through the "Find Users, Contacts and Groups" application, it is also available for Linux and Mac through https://workspace.wur.nl/

== Access ==

Everybody who is a member of RES_CLC_Allowed_Users can use the CLC server. You can also add user groups here.

== Licenses ==

There are two groups:

* RES_CLCGENOMICSWB_7, for people in Biointeractions
* RES_CLCGENOMICSWB_3, for people in Applied Bioinformatics

The content of these groups is automatically synced every hour with the CLC license server.

== Data access ==

The access to folders and data on the CLC server is also managed through groups in the Active Directory.
The following groups are present, and these groups can access their relevant folders:
* RES_CLC_Applied_Bioinformatics
* RES_CLC_Bio_Interactions
* RES_CLC_Bioscience
* RES_CLC_Biosystematics
* RES_CLC_Genetics
* RES_CLC_genomes_and_databases
* RES_CLC_Molecular_Biology
* RES_CLC_Plant_Breeding
* RES_CLC_Plant_Physiology
* RES_CLC_WUR-customer-data

Administrators can use the CLC GUI and [https://clc.anunna.wur.nl:7777 web interface] to change the settings for the folders on the server.

CLC

2025-08-15T13:18:43Z

Lee006: new version of the CLC genomic workbench

For some groups within WUR, Anunna hosts a CLC Genomics Server instance.
We do the technical support, functional support is done by the groups themselves.
So please contact Sven Warris or Theo van der Lee first in case of issues.

The current version of our CLC installation is: '''25.0.2'''

CLC is only available through VPN.

__TOC__

=== CLC Genomics Workbench download ===
The CLC client is the CLC Genomics Workbench. The client can be downloaded from the website of Qiagen:

https://digitalinsights.qiagen.com/products/clc-genomics-workbench-direct-download/

For people at biointeractions a download of the legacy version that we currently use 24.0.2 can be found in the folder:
biointeractions Data\dump\CLC genomic workbench version 24.02

=== CLC License Server Connection ===

If you need to use the CLC license server, these are the credentials for that:

Hostname: clc.anunna.wur.nl

Port: 6200

Username : your WUR username (not haars001)

[[File:CLC License server credentials.png|400px|CLC license server connection credentials]]

=== CLC Server Connection ===

CLC Server Connection credentials:

Server name: clc.anunna.wur.nl

Port: 7777

Username and password are your WUR credentials:

[[File:CLC server credentials.png|400px|CLC Server connection credentials]]

=== CLC Data Management ===

On the old server there was about 100TB of data in use.
To force everybody to think about what they need for their day to day work, it was decided to make the old data available readonly through the OLD_[groupname] folders.

If you need data from the old location, you can copy it to to your group folder.
The data transfer is done on the server, but it might still take a while to finish.

=== CLC User management ===

Access to the CLC server, floating (network) licenses and data access is all managed through groups in the Active Directory.

Managing this on Windows can be done through the "Find Users, Contacts and Groups" application, it is also available for Linux and Mac through https://workspace.wur.nl/

== Access ==

Everybody who is a member of RES_CLC_Allowed_Users can use the CLC server. You can also add user groups here.

== Licenses ==

There are two groups:

* RES_CLCGENOMICSWB_7, for people in Biointeractions
* RES_CLCGENOMICSWB_3, for people in Applied Bioinformatics

The content of these groups is automatically synced every hour with the CLC license server.

== Data access ==

The access to folders and data on the CLC server is also managed through groups in the Active Directory.
The following groups are present, and these groups can access their relevant folders:
* RES_CLC_Applied_Bioinformatics
* RES_CLC_Bio_Interactions
* RES_CLC_Bioscience
* RES_CLC_Biosystematics
* RES_CLC_Genetics
* RES_CLC_genomes_and_databases
* RES_CLC_Molecular_Biology
* RES_CLC_Plant_Breeding
* RES_CLC_Plant_Physiology
* RES_CLC_WUR-customer-data

Administrators can use the CLC GUI and [https://clc.anunna.wur.nl:7777 web interface] to change the settings for the folders on the server.

CLC

2025-03-07T14:56:59Z

Lee006:

For some groups within WUR, Anunna hosts a CLC Genomics Server instance.
We do the technical support, functional support is done by the groups themselves.
So please contact Sven Warris or Theo van der Lee first in case of issues.

The current version of our CLC installation is: '''24.0.2'''

CLC is only available through VPN.

__TOC__

=== CLC Genomics Workbench download ===
The CLC client is the CLC Genomics Workbench. The client can be downloaded from the website of Qiagen:

https://digitalinsights.qiagen.com/products/clc-genomics-workbench-direct-download/

For people at biointeractions a download of the legacy version that we currently use 24.0.2 can be found in the folder:
biointeractions Data\dump\CLC genomic workbench version 24.02

=== CLC License Server Connection ===

If you need to use the CLC license server, these are the credentials for that:

Hostname: clc.anunna.wur.nl

Port: 6200

Username : your WUR username (not haars001)

[[File:CLC License server credentials.png|400px|CLC license server connection credentials]]

=== CLC Server Connection ===

CLC Server Connection credentials:

Server name: clc.anunna.wur.nl

Port: 7777

Username and password are your WUR credentials:

[[File:CLC server credentials.png|400px|CLC Server connection credentials]]

=== CLC Data Management ===

On the old server there was about 100TB of data in use.
To force everybody to think about what they need for their day to day work, it was decided to make the old data available readonly through the OLD_[groupname] folders.

If you need data from the old location, you can copy it to to your group folder.
The data transfer is done on the server, but it might still take a while to finish.

=== CLC User management ===

Access to the CLC server, floating (network) licenses and data access is all managed through groups in the Active Directory.

Managing this on Windows can be done through the "Find Users, Contacts and Groups" application, it is also available for Linux and Mac through https://workspace.wur.nl/

== Access ==

Everybody who is a member of RES_CLC_Allowed_Users can use the CLC server. You can also add user groups here.

== Licenses ==

There are two groups:

* RES_CLCGENOMICSWB_7, for people in Biointeractions
* RES_CLCGENOMICSWB_3, for people in Applied Bioinformatics

The content of these groups is automatically synced every hour with the CLC license server.

== Data access ==

The access to folders and data on the CLC server is also managed through groups in the Active Directory.
The following groups are present, and these groups can access their relevant folders:
* RES_CLC_Applied_Bioinformatics
* RES_CLC_Bio_Interactions
* RES_CLC_Bioscience
* RES_CLC_Biosystematics
* RES_CLC_Genetics
* RES_CLC_genomes_and_databases
* RES_CLC_Molecular_Biology
* RES_CLC_Plant_Breeding
* RES_CLC_Plant_Physiology
* RES_CLC_WUR-customer-data

Administrators can use the CLC GUI and [https://clc.anunna.wur.nl:7777 web interface] to change the settings for the folders on the server.

CLC

2025-03-07T14:56:39Z

Lee006:

For some groups within WUR, Anunna hosts a CLC Genomics Server instance.
We do the technical support, functional support is done by the groups themselves.
So please contact Sven Warris or Theo van der Lee first in case of issues.

The current version of our CLC installation is: '''24.0.2'''

CLC is only available through VPN.

__TOC__

=== CLC Genomics Workbench download ===
The CLC client is the CLC Genomics Workbench. The client can be downloaded from the website of Qiagen:

https://digitalinsights.qiagen.com/products/clc-genomics-workbench-direct-download/
For people at biointeractions a download of the legacy version that we currently use 24.0.2 can be found in the folder:
biointeractions Data\dump\CLC genomic workbench version 24.02

=== CLC License Server Connection ===

If you need to use the CLC license server, these are the credentials for that:

Hostname: clc.anunna.wur.nl

Port: 6200

Username : your WUR username (not haars001)

[[File:CLC License server credentials.png|400px|CLC license server connection credentials]]

=== CLC Server Connection ===

CLC Server Connection credentials:

Server name: clc.anunna.wur.nl

Port: 7777

Username and password are your WUR credentials:

[[File:CLC server credentials.png|400px|CLC Server connection credentials]]

=== CLC Data Management ===

On the old server there was about 100TB of data in use.
To force everybody to think about what they need for their day to day work, it was decided to make the old data available readonly through the OLD_[groupname] folders.

If you need data from the old location, you can copy it to to your group folder.
The data transfer is done on the server, but it might still take a while to finish.

=== CLC User management ===

Access to the CLC server, floating (network) licenses and data access is all managed through groups in the Active Directory.

Managing this on Windows can be done through the "Find Users, Contacts and Groups" application, it is also available for Linux and Mac through https://workspace.wur.nl/

== Access ==

Everybody who is a member of RES_CLC_Allowed_Users can use the CLC server. You can also add user groups here.

== Licenses ==

There are two groups:

* RES_CLCGENOMICSWB_7, for people in Biointeractions
* RES_CLCGENOMICSWB_3, for people in Applied Bioinformatics

The content of these groups is automatically synced every hour with the CLC license server.

== Data access ==

The access to folders and data on the CLC server is also managed through groups in the Active Directory.
The following groups are present, and these groups can access their relevant folders:
* RES_CLC_Applied_Bioinformatics
* RES_CLC_Bio_Interactions
* RES_CLC_Bioscience
* RES_CLC_Biosystematics
* RES_CLC_Genetics
* RES_CLC_genomes_and_databases
* RES_CLC_Molecular_Biology
* RES_CLC_Plant_Breeding
* RES_CLC_Plant_Physiology
* RES_CLC_WUR-customer-data

Administrators can use the CLC GUI and [https://clc.anunna.wur.nl:7777 web interface] to change the settings for the folders on the server.

CLC

2024-10-25T11:17:36Z

Lee006:

For some groups within WUR, Anunna hosts a CLC Genomics Server instance.
We do the technical support, functional support is done by the groups themselves.

The current version of our CLC installation is: '''24.0.2'''

CLC is only available through VPN.

__TOC__

=== CLC Genomics Workbench download ===
The CLC client is the CLC Genomics Workbench. The client can be downloaded from the website of Qiagen:

https://digitalinsights.qiagen.com/products/clc-genomics-workbench-direct-download/

=== CLC License Server Connection ===

If you need to use the CLC license server, these are the credentials for that:

Hostname: clc.anunna.wur.nl

Port: 6200

Username : your WUR username (not haars001)

[[File:CLC License server credentials.png|400px|CLC license server connection credentials]]

=== CLC Server Connection ===

CLC Server Connection credentials:

Server name: clc.anunna.wur.nl

Port: 7777

Username and password are your WUR credentials:

[[File:CLC server credentials.png|400px|CLC Server connection credentials]]

=== CLC Data Management ===

On the old server there was about 100TB of data in use.
To force everybody to think about what they need for their day to day work, it was decided to make the old data available readonly through the OLD_[groupname] folders.

If you need data from the old location, you can copy it to to your group folder.
The data transfer is done on the server, but it might still take a while to finish.

=== CLC User management ===

Access to the CLC server, floating (network) licenses and data access is all managed through groups in the Active Directory.

Managing this on Windows can be done through the "Find Users, Contacts and Groups" application, it is also available for Linux and Mac through https://workspace.wur.nl/

== Access ==

Everybody who is a member of RES_CLC_Allowed_Users can use the CLC server. You can also add user groups here.

== Licenses ==

There are two groups:

* RES_CLCGENOMICSWB_7, for people in Biointeractions
* RES_CLCGENOMICSWB_3, for people in Applied Bioinformatics

The content of these groups is automatically synced every hour with the CLC license server.

== Data access ==

The access to folders and data on the CLC server is also managed through groups in the Active Directory.
The following groups are present, and these groups can access their relevant folders:
* RES_CLC_Applied_Bioinformatics
* RES_CLC_Bio_Interactions
* RES_CLC_Bioscience
* RES_CLC_Biosystematics
* RES_CLC_Genetics
* RES_CLC_genomes_and_databases
* RES_CLC_Molecular_Biology
* RES_CLC_Plant_Breeding
* RES_CLC_Plant_Physiology
* RES_CLC_WUR-customer-data

Administrators can use the CLC GUI and [https://clc.anunna.wur.nl:7777 web interface] to change the settings for the folders on the server.